Index

A

a1 (StackingFaultStatic property) a2 (StackingFaultStatic property) a_values (EvsRScan property) allkeys (Calculation property) alpha (DislocationSDVPN property) anneal_info() (in module iprPy.calculation.dislocation_monopole.dislocation_monopole) (in module iprPy.calculation.dislocation_periodic_array.dislocation_periodic_array)

annealsteps (DislocationMonopole property) (DislocationPeriodicArray property) annealtemperature (DislocationMonopole property) (DislocationPeriodicArray property) aslist() (in module iprPy.tools) atomman_version (Calculation property)

B

B0 (Phonon property) B0prime (Phonon property) bandstructure (Phonon property) beta (DislocationSDVPN property) boolean() (in module iprPy.input) boundaryscale (DislocationMonopole property) (DislocationPeriodicArray property) boundaryshape (DislocationMonopole property) boundarywidth (DislocationMonopole property) (DislocationPeriodicArray property) branch (Calculation property) build_model() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultPath method) (StackingFaultStatic method) (SurfaceEnergyStatic method)

buildcombos() (in module iprPy.input)

C

C (ElasticConstantsStatic property) calc() (Calculation method) (in module iprPy.calculation.point_defect_static.point_defect_static) calc_inputs() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) calc_style (Calculation property) calclist (RunManager property) Calculation (class in iprPy.calculation) cdcsquery() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan static method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) cdiffelastic (DislocationSDVPN property) cdiffstress (DislocationSDVPN property) cdiffsurface (DislocationSDVPN property) centrosummation (PointDefectStatic property) check_modules() (in module iprPy) check_ptd_config() (in module iprPy.calculation.point_defect_static.point_defect_static) cij_run0() (in module iprPy.calculation.relax_box.relax_box) clean() (Calculation method) command_line() (in module iprPy) commands (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property)

commontemplatekeys (Calculation property) compare_fterms (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) compare_terms (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) coord (StackingFaultPath property) crystal_space_group() (in module iprPy.calculation.crystal_space_group.crystal_space_group) CrystalSpaceGroup (class in iprPy.calculation.crystal_space_group.CrystalSpaceGroup) cutofflongrange (DislocationSDVPN property) cycletolerance (RelaxStatic property)

D

d (PointDefectDiffusion property) database (Calculation property) (RunManager property) db_vect_shift (PointDefectStatic property) defect (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (PointDefectDiffusion property) (PointDefectStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) diatom_scan() (in module iprPy.calculation.diatom_scan.diatom_scan) DiatomScan (class in iprPy.calculation.diatom_scan.DiatomScan) dict_insert() (in module iprPy.tools) dicttoterm() (in module iprPy.input) dipole_tensor (PointDefectStatic property) direction (StackingFaultPath property) disl_relax() (in module iprPy.calculation.dislocation_monopole.dislocation_monopole) (in module iprPy.calculation.dislocation_periodic_array.dislocation_periodic_array) dislocation (DislocationMonopole property) (DislocationPeriodicArray property) dislocation_array() (in module iprPy.calculation.dislocation_periodic_array.dislocation_periodic_array) dislocation_monopole() (in module iprPy.calculation.dislocation_monopole.dislocation_monopole)

DislocationMonopole (class in iprPy.calculation.dislocation_monopole.DislocationMonopole) DislocationPeriodicArray (class in iprPy.calculation.dislocation_periodic_array.DislocationPeriodicArray) DislocationSDVPN (class in iprPy.calculation.dislocation_SDVPN.DislocationSDVPN) displacementdistance (Phonon property) displacementkick (RelaxStatic property) disregistries (DislocationSDVPN property) dos (Phonon property) dumpfile_base (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectStatic property) (StackingFaultStatic property) (SurfaceEnergyStatic property) dumpfile_defect (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectStatic property) (StackingFaultStatic property) (SurfaceEnergyStatic property) dumpsteps (PointDefectDiffusion property) (RelaxDynamic property) duplicatecutoff (DislocationPeriodicArray property) dx (PointDefectDiffusion property) dy (PointDefectDiffusion property) dynamic_import() (in module iprPy.tools) dz (PointDefectDiffusion property)

E

E0 (Phonon property) e_vs_r_scan() (in module iprPy.calculation.E_vs_r_scan.e_vs_r_scan) elastic (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) elastic_constants_static() (in module iprPy.calculation.elastic_constants_static.elastic_constants_static) ElasticConstantsStatic (class in iprPy.calculation.elastic_constants_static.ElasticConstantsStatic)

energies (DislocationSDVPN property) energy_values (DiatomScan property) (EvsRScan property) equilsteps (PointDefectDiffusion property) (RelaxDynamic property) error (Calculation property) (StackingFaultPath property) EvsRScan (class in iprPy.calculation.E_vs_r_scan.EvsRScan)

F

filenames (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property)

files (Calculation property) filltemplate() (in module iprPy.tools) final_box (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) final_dump (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) fix_lammps_versions() (in module iprPy) formation_energy (PointDefectStatic property) fullstress (DislocationSDVPN property)

G

gamma (DislocationSDVPN property) (StackingFaultMap2D property)

gsf_displacement (StackingFaultStatic property) gsf_energy (StackingFaultStatic property)

H

has_reconfigured (PointDefectStatic property)

hold_directory (RunManager property) html() (Record method)

I

iaslist() (in module iprPy.tools) idealcell (CrystalSpaceGroup property) initial_dump (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) integrator (RelaxDynamic property) integrator_info() (in module iprPy.calculation.relax_dynamic.relax_dynamic) international (CrystalSpaceGroup property) iprPy module iprPy.calculation module iprPy.calculation.crystal_space_group.crystal_space_group module iprPy.calculation.crystal_space_group.CrystalSpaceGroup module iprPy.calculation.diatom_scan.diatom_scan module iprPy.calculation.diatom_scan.DiatomScan module iprPy.calculation.dislocation_monopole.dislocation_monopole module iprPy.calculation.dislocation_monopole.DislocationMonopole module iprPy.calculation.dislocation_periodic_array.dislocation_periodic_array module iprPy.calculation.dislocation_periodic_array.DislocationPeriodicArray module iprPy.calculation.dislocation_SDVPN.dislocation_SDVPN module iprPy.calculation.dislocation_SDVPN.DislocationSDVPN module iprPy.calculation.E_vs_r_scan.e_vs_r_scan module iprPy.calculation.E_vs_r_scan.EvsRScan module iprPy.calculation.elastic_constants_static.elastic_constants_static module iprPy.calculation.elastic_constants_static.ElasticConstantsStatic module iprPy.calculation.isolated_atom.isolated_atom module iprPy.calculation.isolated_atom.IsolatedAtom module iprPy.calculation.phonon.calc_phonon module iprPy.calculation.phonon.Phonon module iprPy.calculation.point_defect_diffusion.point_defect_diffusion module

iprPy.calculation.point_defect_diffusion.PointDefectDiffusion module iprPy.calculation.point_defect_static.point_defect_static module iprPy.calculation.point_defect_static.PointDefectStatic module iprPy.calculation.relax_box.relax_box module iprPy.calculation.relax_box.RelaxBox module iprPy.calculation.relax_dynamic.relax_dynamic module iprPy.calculation.relax_dynamic.RelaxDynamic module iprPy.calculation.relax_static.relax_static module iprPy.calculation.relax_static.RelaxStatic module iprPy.calculation.stacking_fault_map_2D.stacking_fault_map_2D module iprPy.calculation.stacking_fault_map_2D.StackingFaultMap2D module iprPy.calculation.stacking_fault_static.stacking_fault_static module iprPy.calculation.stacking_fault_static.StackingFaultStatic module iprPy.calculation.surface_energy_static.surface_energy_static module iprPy.calculation.surface_energy_static.SurfaceEnergyStatic module iprPy.database module iprPy.input module iprPy.record module iprPy.tools module iprPy_version (Calculation property) isolated_atom() (in module iprPy.calculation.isolated_atom.isolated_atom) isolated_atom_energy (IsolatedAtom property) IsolatedAtom (class in iprPy.calculation.isolated_atom.IsolatedAtom) isvalid() (Calculation method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (PointDefectStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method)

K

K_tensor (DislocationMonopole property) (DislocationPeriodicArray property)

key (Calculation property)

L

load_calculation() (in module iprPy) (in module iprPy.calculation) load_database() (in module iprPy) (in module iprPy.database) load_model() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) load_parameters() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method)

load_record() (in module iprPy) (in module iprPy.record) load_run_directory() (in module iprPy) load_system_base() (PointDefectStatic method) load_system_defect() (PointDefectStatic method) logfilename (RunManager property) lx_mean (RelaxDynamic property) lx_std (RelaxDynamic property) ly_mean (RelaxDynamic property) ly_std (RelaxDynamic property) lz_mean (RelaxDynamic property) lz_std (RelaxDynamic property)

M

maindoc (Calculation property) master_prepare() (in module iprPy.database) master_prepare_inputs() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) maxcycles (RelaxStatic property) maximum_r (DiatomScan property) (EvsRScan property) measured_pressure_xx (PointDefectDiffusion property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_xx_std (PointDefectDiffusion property) (RelaxDynamic property) measured_pressure_xy (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_xy_std (RelaxDynamic property) measured_pressure_xz (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_xz_std (RelaxDynamic property) measured_pressure_yy (PointDefectDiffusion property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_yy_std (PointDefectDiffusion property) (RelaxDynamic property) measured_pressure_yz (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_yz_std (RelaxDynamic property) measured_pressure_zz (PointDefectDiffusion property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) measured_pressure_zz_std (PointDefectDiffusion property) (RelaxDynamic property) measured_temperature (PointDefectDiffusion property) (RelaxDynamic property) measured_temperature_std (PointDefectDiffusion property) (RelaxDynamic property) metadata() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) min_cells (EvsRScan property) minimize (DislocationMonopole property) (DislocationPeriodicArray property) (ElasticConstantsStatic property) (PointDefectStatic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) minimize_cycles (DislocationSDVPN property) minimize_options (DislocationSDVPN property) minimize_style (DislocationSDVPN property) minimum_r (DiatomScan property) (EvsRScan property) model (Record property) modelroot (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (Record property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property)

module iprPy iprPy.calculation iprPy.calculation.crystal_space_group.crystal_space_group iprPy.calculation.crystal_space_group.CrystalSpaceGroup iprPy.calculation.diatom_scan.diatom_scan iprPy.calculation.diatom_scan.DiatomScan iprPy.calculation.dislocation_monopole.dislocation_monopole iprPy.calculation.dislocation_monopole.DislocationMonopole iprPy.calculation.dislocation_periodic_array.dislocation_periodic_array iprPy.calculation.dislocation_periodic_array.DislocationPeriodicArray iprPy.calculation.dislocation_SDVPN.dislocation_SDVPN iprPy.calculation.dislocation_SDVPN.DislocationSDVPN iprPy.calculation.E_vs_r_scan.e_vs_r_scan iprPy.calculation.E_vs_r_scan.EvsRScan iprPy.calculation.elastic_constants_static.elastic_constants_static iprPy.calculation.elastic_constants_static.ElasticConstantsStatic iprPy.calculation.isolated_atom.isolated_atom iprPy.calculation.isolated_atom.IsolatedAtom iprPy.calculation.phonon.calc_phonon iprPy.calculation.phonon.Phonon iprPy.calculation.point_defect_diffusion.point_defect_diffusion iprPy.calculation.point_defect_diffusion.PointDefectDiffusion iprPy.calculation.point_defect_static.point_defect_static iprPy.calculation.point_defect_static.PointDefectStatic iprPy.calculation.relax_box.relax_box iprPy.calculation.relax_box.RelaxBox iprPy.calculation.relax_dynamic.relax_dynamic iprPy.calculation.relax_dynamic.RelaxDynamic iprPy.calculation.relax_static.relax_static iprPy.calculation.relax_static.RelaxStatic iprPy.calculation.stacking_fault_map_2D.stacking_fault_map_2D iprPy.calculation.stacking_fault_map_2D.StackingFaultMap2D iprPy.calculation.stacking_fault_static.stacking_fault_static iprPy.calculation.stacking_fault_static.StackingFaultStatic iprPy.calculation.surface_energy_static.surface_energy_static iprPy.calculation.surface_energy_static.SurfaceEnergyStatic iprPy.database iprPy.input iprPy.record iprPy.tools mongoquery() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) multikeys (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property)

N

name (Record property) natoms (PointDefectDiffusion property) natoms_base (PointDefectStatic property) natoms_defect (PointDefectStatic property) normalizedisreg (DislocationSDVPN property) nsamples (PointDefectDiffusion property)

num_a1 (StackingFaultMap2D property) num_a2 (StackingFaultMap2D property) number (CrystalSpaceGroup property) number_of_steps_r (DiatomScan property) (EvsRScan property) numsamples (RelaxDynamic property) numstrains (Phonon property)

O

onlylinear (DislocationPeriodicArray property)

orphan_directory (RunManager property)

P

pandasfilter() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) parent_module (Calculation property) parse() (in module iprPy.input) paths (StackingFaultMap2D property) pearson (CrystalSpaceGroup property) Phonon (class in iprPy.calculation.phonon.Phonon) phonon_quasiharmonic() (in module iprPy.calculation.phonon.calc_phonon) phononcalc() (in module iprPy.calculation.phonon.calc_phonon) phonons (Phonon property) pid (RunManager property) pointdefect() (in module iprPy.calculation.point_defect_static.point_defect_static) PointDefectDiffusion (class in iprPy.calculation.point_defect_diffusion.PointDefectDiffusion) PointDefectStatic (class in iprPy.calculation.point_defect_static.PointDefectStatic) pointdiffusion() (in module iprPy.calculation.point_defect_diffusion.point_defect_diffusion) position_shift (PointDefectStatic property) potential (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) potential_energy (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (SurfaceEnergyStatic property)

potential_energy_base (PointDefectStatic property) (StackingFaultStatic property) (SurfaceEnergyStatic property) potential_energy_defect (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectStatic property) (StackingFaultStatic property) (SurfaceEnergyStatic property) potential_energy_std (PointDefectDiffusion property) (RelaxDynamic property) preln (DislocationMonopole property) (DislocationPeriodicArray property) prepare() (in module iprPy.database) pressure_xx (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) pressure_xy (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) pressure_xz (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) pressure_yy (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) pressure_yz (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) pressure_zz (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) primitivecell (CrystalSpaceGroup property) process_results() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method)

Q

qha (Phonon property)

queries (Record property)

R

r_values (DiatomScan property) (EvsRScan property) randomseed (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectDiffusion property) (RelaxDynamic property) raw_Cij_negative (ElasticConstantsStatic property) raw_Cij_positive (ElasticConstantsStatic property) read_calc_file() (in module iprPy.tools) Record (class in iprPy.record) relax_box() (in module iprPy.calculation.relax_box.relax_box) relax_dynamic() (in module iprPy.calculation.relax_dynamic.relax_dynamic) relax_static() (in module iprPy.calculation.relax_static.relax_static) relax_system() (in module iprPy.calculation.surface_energy_static.surface_energy_static) RelaxBox (class in iprPy.calculation.relax_box.RelaxBox)

RelaxDynamic (class in iprPy.calculation.relax_dynamic.RelaxDynamic) RelaxStatic (class in iprPy.calculation.relax_static.RelaxStatic) reload_model() (Record method) reset_orphans() (in module iprPy) (in module iprPy.database) restart_commands() (in module iprPy.calculation.elastic_constants_static.elastic_constants_static) restartsteps (RelaxDynamic property) run() (Calculation method) (RunManager method) run_directory (RunManager property) runall() (RunManager method) RunManager (class in iprPy.database) runner() (in module iprPy.database) runsteps (PointDefectDiffusion property) (RelaxDynamic property)

S

schoenflies (CrystalSpaceGroup property) screen_input() (in module iprPy.tools) script (Calculation property) sdvpn() (in module iprPy.calculation.dislocation_SDVPN.dislocation_SDVPN) sdvpn_solution (DislocationSDVPN property) set_values() (Calculation method) (CrystalSpaceGroup method) (DiatomScan method) (DislocationMonopole method) (DislocationPeriodicArray method) (DislocationSDVPN method) (ElasticConstantsStatic method) (EvsRScan method) (IsolatedAtom method) (Phonon method) (PointDefectDiffusion method) (PointDefectStatic method) (Record method) (RelaxBox method) (RelaxDynamic method) (RelaxStatic method) (StackingFaultMap2D method) (StackingFaultStatic method) (SurfaceEnergyStatic method) shear_mep (StackingFaultPath property) shear_urp (StackingFaultPath property) singularkeys (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) spg_ucell (CrystalSpaceGroup property) stackingfault() (in module iprPy.calculation.stacking_fault_static.stacking_fault_static) stackingfaultmap() (in module iprPy.calculation.stacking_fault_map_2D.stacking_fault_map_2D) StackingFaultMap2D (class in iprPy.calculation.stacking_fault_map_2D.StackingFaultMap2D)

StackingFaultPath (class in iprPy.calculation.stacking_fault_map_2D.StackingFaultMap2D) stackingfaultrelax() (in module iprPy.calculation.stacking_fault_map_2D.stacking_fault_map_2D) (in module iprPy.calculation.stacking_fault_static.stacking_fault_static) StackingFaultStatic (class in iprPy.calculation.stacking_fault_static.StackingFaultStatic) status (Calculation property) strainrange (ElasticConstantsStatic property) (Phonon property) (RelaxBox property) style (Calculation property) (Record property) subsets (Calculation property) surface_energy (SurfaceEnergyStatic property) surface_energy_static() (in module iprPy.calculation.surface_energy_static.surface_energy_static) SurfaceEnergyStatic (class in iprPy.calculation.surface_energy_static.SurfaceEnergyStatic) symbols (DiatomScan property) symbols_base (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectStatic property) symbols_defect (DislocationMonopole property) (DislocationPeriodicArray property) (PointDefectStatic property) symmetryprecision (CrystalSpaceGroup property) (Phonon property) system (CrystalSpaceGroup property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property) system_base (PointDefectStatic property) system_defect (PointDefectStatic property) system_mods (ElasticConstantsStatic property) (EvsRScan property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property)

T

tau (DislocationSDVPN property) temperature (PointDefectDiffusion property) (RelaxDynamic property) template (Calculation property) templatedoc (Calculation property) templatekeys (Calculation property) (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (Phonon property) (PointDefectDiffusion property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property)

termtodict() (in module iprPy.input) theorydoc (Calculation property) thermal (Phonon property) thermosteps (PointDefectDiffusion property) (RelaxDynamic property) total_energy (PointDefectDiffusion property) (RelaxDynamic property) total_energy_std (PointDefectDiffusion property) (RelaxDynamic property)

U

units (CrystalSpaceGroup property) (DiatomScan property) (DislocationMonopole property) (DislocationPeriodicArray property) (DislocationSDVPN property) (ElasticConstantsStatic property) (EvsRScan property) (IsolatedAtom property) (Phonon property) (PointDefectDiffusion property) (PointDefectStatic property) (RelaxBox property) (RelaxDynamic property) (RelaxStatic property) (StackingFaultMap2D property) (StackingFaultStatic property) (SurfaceEnergyStatic property)

update_box() (in module iprPy.calculation.relax_box.relax_box) usf_mep (StackingFaultPath property) usf_urp (StackingFaultPath property)

V

V0 (Phonon property) valid_xml() (Record method)

value() (in module iprPy.input) volumescan (Phonon property)

W

wyckoff_fingerprint (CrystalSpaceGroup property)

wyckoffs (CrystalSpaceGroup property)

X

xmax (DislocationSDVPN property) xnum (DislocationSDVPN property) xscale (DislocationSDVPN property) xsd (Record property) xsd_filename (Calculation property) (Record property)

xsl (Record property) xsl_filename (Record property) xstep (DislocationSDVPN property) xy_mean (RelaxDynamic property) xy_std (RelaxDynamic property) xz_mean (RelaxDynamic property) xz_std (RelaxDynamic property)

Y

yz_mean (RelaxDynamic property)

yz_std (RelaxDynamic property)