• Citation: R.S. Elliott, and A. Akerson (2015), "Efficient "universal" shifted Lennard-Jones model for all KIM API supported species".

    Notes: This is the Pd interaction from the "Universal" parameterization for the openKIM LennardJones612 model driver.The parameterization uses a shifted cutoff so that all interactions have a continuous energy function at the cutoff radius. This model was automatically fit using Lorentz-Berthelotmixing rules. It reproduces the dimer equilibrium separation (covalent radii) and the bond dissociation energies. It has not been fitted to other physical properties and its ability to model structures other than dimers is unknown. See the README and params files on the KIM model page for more details.

  • See Computed Properties
    Notes: Listing found at https://openkim.org.
    Link(s):
  • Citation: X.W. Zhou, R.A. Johnson, and H.N.G. Wadley (2004), "Misfit-energy-increasing dislocations in vapor-deposited CoFe/NiFe multilayers", Physical Review B, 69(14), 144113. DOI: 10.1103/physrevb.69.144113.
    Abstract: Recent molecular dynamics simulations of the growth of [Ni0.8Fe0.2/Au] multilayers have revealed the formation of misfit-strain-reducing dislocation structures very similar to those observed experimentally. Here we report similar simulations showing the formation of edge dislocations near the interfaces of vapor-deposited (111) [NiFe/CoFe/Cu] multilayers. Unlike misfit dislocations that accommodate lattice mismatch, the dislocation structures observed here increase the mismatch strain energy. Stop-action observations of the dynamically evolving atomic structures indicate that during deposition on the (111) surface of a fcc lattice, adatoms may occupy either fcc sites or hcp sites. This results in the random formation of fcc and hcp domains, with dislocations at the domain boundaries. These dislocations enable atoms to undergo a shift from fcc to hcp sites, or vice versa. These shifts lead to missing atoms, and therefore a later deposited layer can have missing planes compared to a previously deposited layer. This dislocation formation mechanism can create tensile stress in fcc films. The probability that such dislocations are formed was found to quickly diminish under energetic deposition conditions.

    Related Models:
  • FORTRAN (2004--Zhou-X-W--Pd--FORTRAN--ipr1)
    Notes: These are the original files sent by X.W. Zhou (Sandia National Laboratory) and posted with his permission. C.A. Becker (NIST) modified create.f to include the reference in the generated potential files and the EAM.input file for this composition. These files can be used to generate alloy potentials for Cu, Ag, Au, Ni, Pd, Pt, Al, Pb, Fe, Mo, Ta, W, Mg, Co, Ti, and Zr by editing EAM.input. However, as addressed in the reference, these potentials were not designed for use with metal compounds.
    File(s): superseded


  • LAMMPS pair_style eam/alloy (2004--Zhou-X-W--Pd--LAMMPS--ipr1)
    See Computed Properties
    Notes: This file was generated by C.A. Becker (NIST) from create.f and posted with X.W. Zhou's (Sandia National Laboratory) permission.
    File(s): superseded


  • FORTRAN (2004--Zhou-X-W--Pd--FORTRAN--ipr2)
    Notes: The file Zhou04_create_v2.f is an updated version of create.f modified by L.M. Hale (NIST) following advice from X.W. Zhou (Sandia National Laboratory). This version removes spurious fluctuations in the tabulated functions of the original potential files caused by single/double precision floating point number conflicts.
    File(s):
  • LAMMPS pair_style eam/alloy (2004--Zhou-X-W--Pd--LAMMPS--ipr2)
    See Computed Properties
    Notes: This file was generated by L.M. Hale from Zhou04_create_v2.f on 13 April 2018 and posted with X.W. Zhou's (Sandia National Laboratory) permission. This version corrects an issue with spurious fluctuations in the tabulated functions.
    File(s):
  • See Computed Properties
    Notes: Listing found at https://openkim.org. This KIM potential is based on the files from 2004--Zhou-X-W--Pd--LAMMPS--ipr2.
    Link(s):
  • Citation: K.W. Jacobsen, P. Stoltze, and J.K. Nørskov (1996), "A semi-empirical effective medium theory for metals and alloys", Surface Science, 366(2), 394-402. DOI: 10.1016/0039-6028(96)00816-3.
    Abstract: A detailed derivation of the simplest form of the effective medium theory for bonding in metallic systems is presented, and parameters for the fcc metals Ni, Pd, Pt, Cu, Ag and Au are given. The derivation of parameters is discussed in detail to show how new parameterizations can be made. The method and the parameterization is tested for a number of surface and bulk problems. In particular we present calculations of the energetics of metal atoms deposited on metal surfaces. The calculated energies include heats of adsorption, energies of overlayers, both pseudomorphic and relaxed, as well as energies of atoms alloyed into the first surface layer.

    Related Models:
  • Citation: J.B. Adams, S.M. Foiles, and W.G. Wolfer (1989), "Self-diffusion and impurity diffusion of fcc metals using the five-frequency model and the Embedded Atom Method", Journal of Materials Research, 4(1), 102-112. DOI: 10.1557/jmr.1989.0102.
    Abstract: The activation energies for self-diffusion of transition metals (Au, Ag, Cu, Ni, Pd, Pt) have been calculated with the Embedded Atom Method (EAM); the results agree well with available experimental data for both mono-vacancy and di-vacancy mechanisms. The EAM was also used to calculate activation energies for vacancy migration near dilute impurities. These energies determine the atomic jump frequencies of the classic "five-frequency formula," which yields the diffusion rates of impurities by a mono-vacancy mechanism. These calculations were found to agree fairly well with experiment and with Neumann and Hirschwald's "Tm" model.

    Related Models:
  • See Computed Properties
    Notes: pdu6.txt was obtained from http://enpub.fulton.asu.edu/cms/ potentials/main/main.htm and posted with the permission of J.B. Adams. The name of the file was retained, even though the header information lists the potential as 'universal 4.' This file is compatible with the "pair_style eam" format in LAMMPS (19Feb09 version).
    File(s):
  • See Computed Properties
    Notes: Listing found at https://openkim.org. This KIM potential is based on the files from 1989--Adams-J-B--Pd--LAMMPS--ipr1.
    Link(s):
  • Citation: S.M. Foiles, M.I. Baskes, and M.S. Daw (1986), "Embedded-atom-method functions for the fcc metals Cu, Ag, Au, Ni, Pd, Pt, and their alloys", Physical Review B, 33(12), 7983-7991. DOI: 10.1103/physrevb.33.7983.
    Abstract: A consistent set of embedding functions and pair interactions for use with the embedded-atom method [M.S. Daw and M. I. Baskes, Phys. Rev. B 29, 6443 (1984)] have been determined empirically to describe the fcc metals Cu, Ag, Au, Ni, Pd, and Pt as well as alloys containing these metals. The functions are determined empirically by fitting to the sublimation energy, equilibrium lattice constant, elastic constants, and vacancy-formation energies of the pure metals and the heats of solution of the binary alloys. The validity of the functions is tested by computing a wide range of properties: the formation volume and migration energy of vacancies, the formation energy, formation volume, and migration energy of divacancies and self-interstitials, the surface energy and geometries of the low-index surfaces of the pure metals, and the segregation energy of substitutional impurities to (100) surfaces.

    Related Models:
  • See Computed Properties
    Notes: This file was taken from the August 22, 2018 LAMMPS distribution.
    File(s):
  • See Computed Properties
    Notes: Listing found at https://openkim.org. This KIM potential is based on the same files as 1986--Foiles-S-M--Pd--LAMMPS--ipr1.
    Link(s):
 
  • Citation: X.W. Zhou, R.A. Johnson, and H.N.G. Wadley (2004), "Misfit-energy-increasing dislocations in vapor-deposited CoFe/NiFe multilayers", Physical Review B, 69(14), 144113. DOI: 10.1103/physrevb.69.144113.
    Abstract: Recent molecular dynamics simulations of the growth of [Ni0.8Fe0.2/Au] multilayers have revealed the formation of misfit-strain-reducing dislocation structures very similar to those observed experimentally. Here we report similar simulations showing the formation of edge dislocations near the interfaces of vapor-deposited (111) [NiFe/CoFe/Cu] multilayers. Unlike misfit dislocations that accommodate lattice mismatch, the dislocation structures observed here increase the mismatch strain energy. Stop-action observations of the dynamically evolving atomic structures indicate that during deposition on the (111) surface of a fcc lattice, adatoms may occupy either fcc sites or hcp sites. This results in the random formation of fcc and hcp domains, with dislocations at the domain boundaries. These dislocations enable atoms to undergo a shift from fcc to hcp sites, or vice versa. These shifts lead to missing atoms, and therefore a later deposited layer can have missing planes compared to a previously deposited layer. This dislocation formation mechanism can create tensile stress in fcc films. The probability that such dislocations are formed was found to quickly diminish under energetic deposition conditions.

    Notes: This is a combined potential that contains all 16 elements from the source reference. It is provided here due to various requests for more elemental combinations often for high entropy simulations. As a caution, note that all of the cross interactions are determined through a universal mixing function and that most elemental systems were not thoroughly explored and tested by the original authors meaning that most binary and higher-order systems may not be well optimized.

  • See Computed Properties
    Notes: This file was generated by Ilia Nikiforov using the Zhou04_create_v2.f FORTRAN code which can be found on the associated elemental listings. The code was slightly modified to increase the tabulation points to 3000 to ensure good interpolations of the embedding energy function for all elements as W has a noticeably larger delta rho than the other elements. Also, the header was fixed to include all 16 element symbol tags.
    File(s):
 
 
 
 
 
 
  • Citation: S. Pal, and S. Mukhopadhyay (2024), "Development of embedded-atom method (EAM) potential for Palladium-Barium alloy", Molecular Simulation, 1-10. DOI: 10.1080/08927022.2024.2376327.
    Abstract: An embedded-atom method (EAM) potential for the Pd-Ba alloy system has been developed in order to forward computational research in this alloying system as there is no EAM potential available for this alloy system. The force-matching method has been implemented to develop the EAM potential first, and then, optimisation to converged density-functional theory (DFT) data sets has been done to generate the accurate and reliable potential for the Pd-Ba alloy system. Some physical, elastic and thermal properties of BaPd2 crystal have been calculated through molecular dynamics (MD) simulation using the developed EAM potential and then verified these properties with the help of DFT analysis in order to examine the performance of the potential. The presence of some even peaks of BaPd2 in virtual XRD spectra using MD simulation has been justified by DFT analysis. Slight deviations in melting points calculation at different compositions of the Pd-Ba alloy system have been observed. Higher Ba-Pd interaction using radial distribution characteristics and slower kinetics for inter-diffusion through diffusional characteristics study of BaPd2 have been reported using MD simulation with the developed EAM potential. In spite of some discrepancies due to deficiency in the potential, a closer agreement between MD and DFT analysis has been observed.

    Notes: Sankhasubhra Mukhopadhyay notes that "This EAM potential is useful to describe different physical, thermal, and mechanical characteristics of the Pd-Ba alloy system."

  • LAMMPS pair_style eam/alloy (2024--Pal-S--Ba-Pd--LAMMPS--ipr1)
    See Computed Properties
    Notes: This file was provided by Sankhasubhra Mukhopadhyay on August 19, 2024.
    File(s):
 
 
 
  • Citation: G. Arora, G. Bonny, N. Castin, and D.S. Aidhy (2021), "Effect of different point-defect energetics in Ni80X20 (X=Fe, Pd) on contrasting vacancy cluster formation from atomistic simulations", Materialia, 15, 100974. DOI: 10.1016/j.mtla.2020.100974.
    Abstract: Recent irradiation experiments have shown that smaller vacancy clusters are observed in Ni80Pd20 compared to Ni80Fe20. Using atomistic calculations, we find that the vacancy energetics are significantly different between the two alloys. Ni80Pd20 has lower vacancy migration barriers and lower vacancy-vacancy binding energies than Ni80Fe20. The consequence of these energetic differences is observed in molecular dynamics (MD) simulations, where despite higher vacancy diffusivity that would help in cluster formation, significantly reduced vacancy clusters are observed in Ni80Pd20 than Ni80Fe20. Calculations show that binding energy decreases and formation energy increases with increasing Ni-Ni bond lengths, and larger Ni-Ni bond lengths are observed in Ni80Pd20 than Ni80Fe20. Thus, the reduced vacancy-vacancy binding and higher formation energy due to longer Ni-Ni bonds in Ni80Pd20 are possibly the underlying reasons for smaller vacancy clusters in Ni80-Pd20 than Ni80Fe20. This study illustrates the unique effects of alloying elements on defect energetics and microstructural evolution in random alloys.

    Notes: Gaurav Arora notes that "This is one of the first types of potentials used to study radiation defects in alloys containing Pd and is a modified version of 2018--Bonny-G-Chakraborty-D-Pandey-S-et-al--Ni-Fe-Cr-Pd. This potential was specifically developed to study defect energetics, such as vacancy formation energies, binding energies, voids, stacking fault tetrahedra (SFTs) formation, and other radiation defects in high entropy alloys."

  • LAMMPS pair_style eam/alloy (2021--Arora-G--Fe-Ni-Cr-Pd--LAMMPS--ipr1)
    See Computed Properties
    Notes: This file was provided by Gaurav Arora on July 17, 2024.
    File(s):
  • Citation: G. Bonny, D. Chakraborty, S. Pandey, A. Manzoor, N. Castin, S.R. Phillpot, and D.S. Aidhy (2018), "Classical interatomic potential for quaternary Ni-Fe-Cr-Pd solid solution alloys", Modelling and Simulation in Materials Science and Engineering, 26(6), 065014. DOI: 10.1088/1361-651x/aad2e7.
    Abstract: In this paper, we present a new quaternary interatomic potential for the NiFeCrPd system, which is an extension on the previous NiFeCr potential. Density functional theory is used to calculate the quantities to be fitted, with particular focus on the energetics of point defects with solutes, for the potential to be used towards understanding radiation damage properties. The potential thus will enable the modeling of multi-elemental solid solution alloys consisting of up to four elements. To test the potential, we have performed atomistic kinetic Monte Carlo simulations to investigate the effect of configurational entropy on the self-diffusion coefficients. The self-diffusion coefficients are found to increase with chemical complexity, contrary to the common postulation of sluggish diffusion in high entropy alloys (HEAs). In addition, we have performed molecular dynamics simulations to elucidate the effect of Pd on vacancy diffusion and clustering in pure Ni and binary alloys. In agreement with recent irradiation experiments, our simulations show that while large vacancy clusters, such as stacking fault tetrahedra, are formed in pure Ni, Ni-Fe and Ni-Cr systems, negligible vacancy clustering is observed in Ni-Pd systems, indicating a possible effect of Pd in reducing cluster sizes. We suggest that this potential will be useful for studying the defect evolution in multi-component HEAs.

 
 
 
  • Citation: X.W. Zhou, N.C. Bartelt, and R.B. Sills (2021), "Enabling simulations of helium bubble nucleation and growth: A strategy for interatomic potentials", Physical Review B, 103(1), 014108. DOI: 10.1103/physrevb.103.014108.
    Abstract: Helium bubbles are a severe form of radiation damage that has been frequently observed. It would be possible to understand the complex processes that cause bubble formation if suitable interatomic potentials were available to enable molecular dynamics simulations. In this paper, Pd-H-He embedded-atom method potentials based on both Daw-Baskes and Finnis-Sinclair formalisms have been developed to enable modeling of He bubbles formed by the radioactive decay of tritium in Pd. Our potentials incorporate helium into an existing Pd-H potential while addressing two challenging paradoxes: (a) Interstitial He atoms can dramatically lower their energies by forming dimers and larger clusters in Pd but are only bound by weak van der Waals forces in the gas phase. (b) He atoms diffuse readily in Pd yet significantly distort the Pd lattice with large volume expansions. We demonstrate that both of our potentials reproduce density functional theory results for (b). However, the Daw-Baskes formalism fails to resolve paradox (a) because it cannot reproduce the experimental helium equation of state. We resolved this problem through a modification of the Finnis-Sinclair formalism in which a (fictitious) negative embedding charge density is produced by Pd at the He binding sites. In addition to molecular statics validation of static properties, molecular dynamics simulation tests establish that our Finnis-Sinclair potential leads to the nucleation of helium bubbles from an initial random distribution of helium interstitial atoms.

  • See Computed Properties
    Notes: This file was provided by Xiaowang Zhou (Sandia) on March 24, 2021 and posted with his permission. The eam/he pair style was added to LAMMPS starting with the 10 Feb 2021 version.
    File(s):
 
 
 
  • Citation: Y. Xu, G. Wang, P. Qian, and Y. Su (2022), "Element segregation and thermal stability of Ni–Pd nanoparticles", Journal of Materials Science, . DOI: 10.1007/s10853-022-07118-7.
    Abstract: A new high-precision angular-dependent potential of the Ni-Pd system was obtained by fitting the experimental data and first-principles calculations. Then, the element segregation characteristics and thermal stability of Ni-Pd bimetallic nanoparticles were investigated by Monte Carlo method and molecular dynamics method. The results show that the chemical ordering pattern of PdxNi1-x nanoparticle is the result of the competition of surface energy, strain energy, bond energy and interface energy. When a small amount of Pd atoms are substitutionally doped into the Ni nanoparticle, all the Pd atoms will be segregated on the surface and dispersed. The synergistic effect of Ni atoms and Pd atoms in the surface will improve the catalytic activity and carbon deposition resistance of PdxNi1-x nanoparticle catalyst in methane dry reforming reaction. Increasing the doping amount of Pd atoms will gradually reduce the melting point of PdxNi1-x nanoparticle, thereby reducing its sintering resistance.

  • LAMMPS pair_style adp (2022--Xu-Y--Ni-Pd--LAMMPS--ipr1)
    See Computed Properties
    Notes: This file was provided by Gang Wang on April 4, 2022.
    File(s):
 
 
Date Created: October 5, 2010 | Last updated: November 20, 2024